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Wiley InterScience

FEMS Microbiology Letters

FEMS Microbiology Letters

Volume 276 Issue 2, Pages 202 - 206

Published Online: 19 Oct 2007

© 2010 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved



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RESEARCH LETTER
Global gene expression profiling of wild type and lysC knockout Escherichia coli W3110
Daniel Yuen-Teh Liu 1 , Chia-Hsin Liu 1 , Ming-Tsong Lai 1 , Hua-Kuo Lin 1 & Tzong-Hsiung Hseu 1
  1 Department of Life Science, Institute of Biotechnology, National Tsing Hua University, Hsinchu, Taiwan
  Correspondence: Tzong-Hsiung Hseu, Department of Life Science, Institute of Biotechnology, National Tsing Hua University, No. 101, Sec. 2, Kuang Fu Rd, Hsinchu, Taiwan 30013. Tel.: +886 3 5742746; fax: +886 3 5715934; e-mail: lshth@life.nthu.edu.tw

 Editor: Robert Gunsalus

Copyright © 2007 Federation of European Microbiological Societies
KEYWORDS
Escherichia coli • gene knockout • lysC • lysine starvation • microarray

ABSTRACT

Aspartokinase III, encoded by lysC, is responsible for the first step of lysine biosynthesis in Escherichia coli. In this study, a lysC knockout E. coli W3110 strain was generated to study the differential gene expression profiles of wild type and lysC knockout strains. Several significant changes were observed, including biosynthesis of lysine, oxaloacetate, α-ketoglutarate and glutamate genes. Genes related to transporters and heat shock proteins were also affected by lysC knockout. The results indicated that the lysC knockout strain exhibited some phenomena similar to lysine starvation. The data generated by this study further clarify the systematic role of lysC in lysine biosynthesis.


Received 22 June 2007; accepted 30 August 2007.
First published online October 2007.

DIGITAL OBJECT IDENTIFIER (DOI)
10.1111/j.1574-6968.2007.00932.x About DOI

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