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Wiley InterScience

FEMS Microbiology Ecology

FEMS Microbiology Ecology

Volume 48 Issue 1, Pages 101 - 107

Published Online: 5 Jan 2006

© 2009 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved



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High diversity of chickpea Mesorhizobium species isolated in a Portuguese agricultural region
Marta Laranjo a, b , Jorge Machado c , J.Peter W. Young d , Solange Oliveira a, b, *
  a Departamento de Biologia, Universidade de Évora, Apartado 94, 7002-554 Évora, Portugal   b Laboratório de Microbiologia do Solo-ICAM (Instituto de Ciências Agrárias Mediterrânicas), Universidade de Évora, Portugal   c Laboratório de Bacteriologia, Instituto Nacional de Saúde Dr. Ricardo Jorge, Lisboa, Portugal   d Department of Biology, University of York, UK
  *Corresponding author. Tel.: +351-266-760878; fax: +351-266-711231. Email address:ismo@uevora.pt
Copyright 2004 Federation of European Microbiological Societies
KEYWORDS
Mesorhizobium • 16S-rDNA • DAPD • Chickpea • Diversity • Microbial ecology

ABSTRACT

Chickpea rhizobia isolated from Portuguese soils were assigned to the genus Mesorhizobium by 16S-rDNA sequencing. High species diversity was found within populations of an agricultural region in the south of Portugal. Besides the expected Mesorhizobium ciceri and M. mediterraneum, some isolates were close to M. loti or M. tianshanense and some formed a clade that may represent a new species. A new PCR-based approach, named direct amplified polymorphic DNA (DAPD) analysis, supported the 16S-based phylogeny. This suggests that this method could be used as a molecular tool to assess genetic relationships. Evaluation of genetic diversity by 16S-rDNA sequence, DAPD and protein profiles showed different levels of heterogeneity in natural populations.


Received 10 July 2003, Revised 19 November 2003, Accepted 23 December 2003

DIGITAL OBJECT IDENTIFIER (DOI)
10.1016/j.femsec.2003.12.015 About DOI

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