ADVERTISEMENT

If you are seeing this message, you may be experiencing temporary network problems. Please wait a few minutes and refresh the page. If the problem persists, you may wish to report it to your local Network Manager.

It is also possible that your web browser is not configured or not able to display style sheets. In this case, although the visual presentation will be degraded, the site should continue to be functional. We recommend using the latest version of Microsoft or Mozilla web browser to help minimise these problems.

Wiley InterScience

Annals of Human Genetics

Annals of Human Genetics

Volume 67 Issue 4, Pages 357 - 366

Published Online: 15 Jul 2003

Journal compilation © 2010 Blackwell Publishing Ltd/University College London



< Previous Abstract  |  Next Abstract >

Save Article to My Profile      Download Citation      Request Permissions

Abstract |  References  |  Full Text: HTML, PDF (Size: 113K)  | Related Articles | Citation Tracking

A Marginal Likelihood Model for Family-Based Data
Shaw-Hwa Lo*, Xin Liu 1 and Yongzhao Shao 2
  1 Lab of Statistical Genetics, Rockefeller University, 1230 York Avenue, New York, NY 10021   2 Department of Statistics, Columbia University, 2990 Broadway, New York, NY 10027
Correspondence to   *Department of Statistics, Columbia University, 2990 Broadway, New York, NY 10027. Phone: (212)854-3639; Fax: (212)663-2454. E-mail: slo@stat.columbia.edu
Copyright 2003 University College London

Summary

AbstractIntroductionModel and LikelihoodSimulationsA Real Data Example: Application to Tourette SyndromeReferences

This paper presents a marginal likelihood model for family-based data based upon the transmission of marker alleles from each heterozygous parent to his/her affected children. The proposed model, extending the maximum-likelihood-binomial (MLB) method and the disequilibrium maximum-likelihood-binomial (DMLB) method (Abel et al. 1998; Abel & Müller-Myhsok, 1998; Huang & Jiang, 1999), is adaptive to linkage disequilibrium (LD) and linkage heterogeneity. Compared with other procedures, the likelihood ratio test (LRT) derived from the proposed model enjoys superior qualities. First, simulations indicate that the power of the LRT is greater than that of the TDT or DMLB in all of our studied scenarios. Second, when we applied the LRT and other tests to a Tourette Syndrome data, the result was data favorable to the use of the LRT. Therefore, we recommend the use of the LRT as an additional linkage test wherever applicable, especially when the amount of LD is uncertain.


Received: 18 February 2002 Accepted: 31 January 2003

DIGITAL OBJECT IDENTIFIER (DOI)
10.1046/j.1469-1809.2003.00032.x About DOI

Related Articles

  • Find other articles like this in Wiley InterScience
  • Find articles in Wiley InterScience written by any of the authors

Wiley InterScience is a member of CrossRef.

Cross Ref Member


Sign up here
Sign up here
Special Issue
American Journal of Physical Anthropology

American Journal of Physical Anthropology

Special Issue: Race Reconciled: How Biological Anthropologists View Human Variation.

Read Now

Currentprotocols.com
Sign up for Content Alerts
Journal Backfiles